Publications
(* corresponding author, # co-first author)
Statistical Publications
Bencong Zhu, Guanyu Hu, Xiaodan Fan , and Qiwei Li. Generalized Bayesian nonparametric clustering framework for high-dimensional spatial omics data. (2024) [Arixv]
Bencong Zhu, Guanyu Hu, Yang Xie, Lin Xu, Xiaodan Fan , and Qiwei Li. Bayesian Nonparametric Clustering with Feature Selection for Spatially Resolved Transcriptomics Data. (2024) The Annals of Applied Statistics in revision [Arxiv] [GitHub]
Tejasv Bedi#, Bencong Zhu#, Michael L Neugent, Kevin C Lutz, Nicole J De Nisco, and Qiwei Li. Bayesian modeling of co-occurrence microbial interaction networks. [Arxiv]
Bencong Zhu, Zhen Zhang, Seut Yi Leung, Xiaodan Fan. NetMIM: Network-based multi-omics integration with block missingness for biomarker selection and disease outcome prediction. (2023) Briefings in Bioinformatics, 25 (5), bbae454 [link]
Huimin Li, Bencong Zhu*, Xi Jiang, Lei Guo, Yang Xie, Lin Xu, and Qiwei Li. An interpretable Bayesian clustering approach with feature selection for analyzing spatially resolved transcriptomics data. (2023) Biometrics, 80 (3), ujae066 [link]
Mengyu Li, Bencong Zhu, Cheng Meng, and Xiaodan Fan. Double optimal transport for gene regulatory network reconstruction with unpaired samples. Submitted to Bioinformatics.
Yanghong Guo, Bencong Zhu, Chen Tang, Ruichen Rong, Lin Xu, Qiwei Li. Bayesian Clustering of Multi-sample Spatially Resolved Transcriptomics Data. (2024) Briefings in Bioinformatics, accept
Xi Jiang, Shidan Wang, Lei Guo, Bencong Zhu, Zhuoyu Wen, Liwei Jia, Lin Xu, Guanhua Xiao, and Qiwei Li. Integrating image and molecular profiles for spatial transcriptomics analysis. (2024) Genome Biology, 25, 147 [link]
Jin Du, Chaojie Wang, Lijun Wang, Shanjun Mao, Bencong Zhu, Zheng Li, Xiaodan Fan. Automatic block-wise genotype-phenotype association detection based on hidden Markov model. (2023) BMC Bioinformatics, 24 (1), 138
Other Publications
Bencong Zhu, Tao Shen, Xiaoqiang Huang, Yuchao Zhu, Song Song, Ning Jiao. Selective aerobic oxygenation of tertiary allylic alcohols with molecular oxygen. (2019) Angewandte Chemie International Edition, 58 (32), 11028-11032
Junhua Li, Jialiang Wei, Bencong Zhu, Teng Wang, Ning Jiao. Cu-catalyzed oxygenation of alkene-tethered amides with O2 via unactivated C=C bond cleavage: a direct approach to cyclic imides. (2019) Chemical Science, 10 (39), 9099-9103
Tao Shen, Bencong Zhu, Fengguirong Lin, Jun Pan, Jialiang Wei, Xiao Luo, Jianzhong Liu, Ning Jiao. Direct synthesis of structurally divergent indole alkaloids from simple chemicals. (2018) Chinese Journal of Chemistry, 36 (9), 815-818
Song Song, Yiqun Zhang, Adeli Yeerlan, Bencong Zhu, Jianzhong Liu, Ning Jiao. Cs2CO3‐Catalyzed Aerobic Oxidative Cross‐Dehydrogenative Coupling of Thiols with Phosphonates and Arenes. (2017) Angewandte Chemie International Edition, 56 (9), 2487-2491
Jianzhong Liu, Xiaojin Wen, Chong Qin, Xinyao Li, Xiao Luo, Ao Sun, Bencong Zhu, Song Song, Ning Jiao. Oxygenation of Simple Olefins through Selective Allylic C−C Bond Cleavage: A Direct Approach to Cinnamyl Aldehydes. (2017) Angewandte Chemie International Edition, 56 (39), 11940-11944